參考文獻

[1]　Suflita J M，Davidova I A，Gieg L M，et al. Anaerobic hydrocarbon biodegradation and the prospects for microbial enhanced energy production[M].Amsterdam: Elsevier Science，2004：283-305.

[2]　Rowe D，Muehlenbachs A. Low-temperature thermal generation of hydrocarbon gases in shallow shales[J]. Nature，1999，398（6722）: 61-63.

[3]　Parkes J. Cracking anaerobic bacteria[J]. Nature，1999，401（6750）: 217-218.

[4]　Hallmann C，Schwark L，Grice K. Community dynamics of anaerobic bacteria in deep petroleum reservoirs[J]. Nature Geoscience，2008，1（9）: 588-591.

[5]　Head I M，Jones D M，Larter S R.Biological activity in the deep subsurface and the origin of heavy oil[J]. Nature，2003，426（6964）: 344-352.

[6]　Jackson B E，McInerney M J. Anaerobic microbial metabolism can proceed close to thermodynamic limits[J]. Nature，2002，415（6870）: 454-456.

[7]　Larter S R，Wilhelms A，Head I M，et al. The controls on the composition of biodegraded oils in the deep subsurface. Part 1: biodegradation rates in petroleum reservoirs[J].Organic Geochemistry，2003，34（4）: 601-613.

[8]　Jennings E，Tanner R. The Effects of a bacillus biosurfactant on methanogenic hexadecane degradation[J]. Bioremediation Journal，2004，8（1/2）: 79 86.

[9]　Gieg L M，Duncan K E，Suflita J M.Bioenergy production via microbial conversion of residual oil to natural gas[J]. Appied and Environmental Microbiology，2008，74（10）: 3022-3029.

[10]　Youssef N，Elshahed M S，McInerney M J.Microbial process in oil fields: culprits，problems and opportunities，advances in applied microbiology[M]. Amsterdam: Elsevier Academic Press，2008：141-251.

[11]　Belyaev S S，Borzenkov I A，Nazina T N，et al. Use of microorganisms in the biotechnology for the enhancement of oil recovery[J]. Microbiology，2004，73（5）: 590-598.

[12]　McInerney M J，Nagle D P，Knapp R M.Microbially enhanced oil recovery: past，present and future[J]. Petroleum Microbiology，2005: 215-237.

[13]　王俊，俞理，黃立信. 油藏生物氣研究進展[J]. 特種油氣藏，2010，05（4）: 8-12.

[14]　王萬春，陶明信. 地質微生物作用與油氣資源[J].地質通報，2005，24（10-11）: 1022-1026.

[15]　李贊豪，李季，向龍斌，等. 1原油的厭氧細菌降解作用及其產物特征[J].石油與天然氣地質，1998，19（1）: 29-34.

[16]　張水昌，趙文智，李先奇，等. 生物氣研究新進展與勘探策略[J]. 石油勘探與開發，2005，04（3）: 90-96.

[17]　汪衛東，王靜，耿雪麗，等. 儲層殘余油生物氣化技術現狀與展望[J]. 石油地質與工程，2012，01（2）: 78-81.

[18]　Muller F M.On methane fermentation of higher alkanes[J]. Antonie van Leeuwenhoek，1957，23（1）: 369-384.

[19]　Jack T R，Lee E，Mueller J. Anaerobic gas production from crude oil[J]. Microbes and Oil Recovery: International Bioresources Journal，1985，1（1）: 167-180.

[20]　Zengler K，Richnow H H，Rossello-Mora R，et al. Methane formation from long-chain alkanes by anaerobic microorganisms[J]. Nature，1999，401（6750）: 266-269.

[21]　Anderson R T，Lovley D R.Hexadecane decay by methanogenesis[J]. Nature，2000，404（13）: 722-723.

[22]　Townsend G T，Prince R C，Suflita J M.Anaerobic oxidation of crude oil hydrocarbons by the resident microorganisms of a contaminated anoxic aquifer[J]. Environmental Sci ence and Technology，2003，37（22）: 5213-5218.

[23]　Siddique T，Fedorak P M，Foght J M.Biodegradation of short-chain n-alkanes in oil sands tailings under methanogenic conditions[J]. Environmental Science and Technology，2006，40（17）: 5459-5464.

[24]　Jones D M，Head I M，Gray N D，et al.Crude oil biodegradation via methanogenesis in subsurface petroleum reservoirs[J]. Nature，2008，451（7175）: 176-181.

[25]　R?ling W F M，Head I M，Larter S R.The microbiology of hydrocarbon degradation in subsurface petroleum reservoirs: perspectives and prospects[J]. Research in Microbiology，2003，154（5）: 321-328.

[26]　Milkov A V，Dzou L.Geochemical evidence of secondary microbial methane from very slight biodegradation of undersaturated oils in a deep hot reservoir[J]. Geology，2007，35（5）: 455-458.

[27]　Orphan V J，Taylor L T，Hafenbradl D，et al.Culture-dependent and culture-independent characterization of microbial assemblages associated with high-temperature petroleum reservoirs[J]. Applied and Environmental Microbiology，2000，66（2）: 700-711.

[28]　Nazina T N，Shestakova N M，Grigor’yan A A，et al.Phylogenetic diversity and activity of anaerobic microorganisms of high-temperature horizons of the Dagang oil field （PR China） [J]. Microbiology，2006，75（1）: 55-65.

[29]　Magot M. Indigenous microbial communities in oil fields，petroleum microbiology[M]. Washington DC: ASM Press，2005: 21-33.

[30]　Pham V D，Hnatow L L，Zhang S，et al.Characterizing microbial diversity in production water from an Alaskan mesothermic petroleum reservoir with two independent molecular methods[J]. Environmental Microbiology，2009，11（1）: 176-187.

[31]　Gray N D，Sherry A，Larter S R，et al.Biogenic methane production in formation waters from a large gas field in the North Sea[J]. Extremophiles，2009，13（3）: 511-519.

[32]　Duncan K E，Gieg L M，Parisi V A，et al. Biocorrosive thermophilic microbial communities in Alaskan North Slope oil facilities[J]. Environmental Science and Technology，2009，43（20）: 7977-7984.

[33]　Aitken C M，Jones D M，Larter S R.Anaerobic hydrocarbon biodegradation in deep subsurface oil reservoirs[J]. Nature，2004，431（7006）: 291-294.

[34]　馮一瀟. 油藏發酵細菌的鑒定及石油烴厭氧生物代謝機理初探[D]. 北京： 中國農業科學院，2009.

[35]　承磊. 石油烴厭氧生物降解過程中的產甲烷古菌研究[D]. 北京： 中國農業科學院，2007.

[36]　劉金峰，牟伯中. 油藏極端環境中的微生物[J]. 微生物學雜志，2004，24（4）: 31-34.

[37]　黎霞. 油藏發酵細菌的鑒定及石油烴厭氧生物降解研究[D]. 北京： 中國農業科學院，2008.

[38]　吳偉林. 石油烴厭氧降解菌的篩選及其降解特性研究[D]. 青島： 中國石油大學（華東），2011.

[39]　Mbadinga Serge Maurice. 高溫油藏微生物群落結構及石油烴厭氧降解產甲烷體系構建研究[D].上海： 華東理工大學，2012.

[40]　麻婷婷. 乙酸和硫酸鹽對石油烴降解產甲烷過程影響的研究[D].北京： 中國農業科學院，2014.

[41]　周蕾. 厭氧烴降解產甲烷菌系的組成及其代謝產物的特征[D].上海： 華東理工大學，2012.

[42]　何喬. 烴類化合物厭氧降解產甲烷中間代謝產物初探[D].北京： 中國農業科學院，2013.

[43]　王立影. 烷烴厭氧降解產甲烷體系菌群結構與功能的研究[D].上海： 華東理工大學，2011.

[44]　丁晨. 低溫石油烴降解產甲烷富集物的培養及微生物群落結構分析[D].北京： 中國農業科學院，2013.

[45]　李凱平. 長鏈烷烴厭氧降解產甲烷體系的菌群組成及變化[D].上海： 華東理工大學，2012.

[46]　Bauschlicher J R，Langhoff S R.Bond dissociation energies for substituted polycyclic aromatic hydrocarbons and their cations[J]. Molecular Physics，1999，96（4）: 471-476.

[47]　Widdel F，Rabus R. Anaerobic biodegradation of saturated and aromatic hydrocarbons[J]. Current Opinion Biotechnology，2001，12（3）: 259-276.

[48]　王俊. 油藏產氣微生物代謝機理研究[D]. 北京： 中國科學院研究生院（滲流流體力學研究所），2011.

[49]　Dolfing J，Larter S R，Head I M.Thermodynamic constraints on methanogenic crude oil biodegradation[J]. The ISME Journal，2008，2（4）: 442-452.

[50]　Westerholm M. Biogas production through the syntrophic acetate-oxidising pathway: Characterization and detection of syntrophic acetate-oxidising bacteria[M]. Uppsala: Swedish University of Agricultural Sciences，2012：15-29.

[51]　朱光有，張水昌，趙文智，等. 中國稠油區淺層天然氣地球化學特征與成因機制[J]. 中國科學： D 輯，2008，37（A02）: 80-89.

[52]　Roling W F M，Head I M，Larter S R.The microbiology of hydrocarbon degradation in subsurface petroleum reservoirs: perspectives and prospects[J]. Research in Microbiology，2003，154（5）: 321-328.

[53]　Chakraborty R，Coates J D.Anaerobic degradation of monoaromatic hydrocarbons[J].Applied Microbiology and Biotechnology，2004，64（4）: 437-446.

[54]　Lovley D R，Baedecker M J，Lonergan D J，et al.Oxidation of aromatic contaminants coupled to microbial iron reduction[J]. Nature，1989，339（6222）: 297-300.

[55]　Aeckersberg F，Bak F，Widdel F. Anaerobic oxidation of saturated hydrocarbons to CO₂ by a new type of sulfate-reducing bacterium[J]. Archives of Microbiology，1991，156（1）: 5-14.

[56]　Heider J，Spormann A M，Beller H R，et al.Anaerobic bacterial metabolism of hydrocarbons[J]. FEMS Microbiology Reviews，1999，22（5）: 459-473.

[57]　Spormann A M，Widdel F. Metabolism of alkylbenzenes，alkanes，and other hydrocarbons in anaerobic bacteria[J]. Biodegradation，2000，11（2/3）: 85-105.

[58]　Widdel F，Boetius A，Rabus R. Anaerobic biodegradation of hydrocarbons including methane，the Prokaryotes: Archaea. Bacteria: Firmicutes，Actinomycetes[M]. New York: Springer，2006: 1028-1049.

[59]　Grossi V，Cravo-Laureau C，Guyoneaud R，et al.Metabolism of n-alkanes and n-alkenes by anaerobic bacteria: a summary[J]. Organic Geochemistry，2008，39（8）: 1197-1203.

[60]　Mbadinga S M，Wang L Y，Zhou L，et al. Microbial communities involved in anaerobic degradation of alkanes[J]. International Biodeterioration and Biodegradation，2011，65（1）: 1-13.

[61]　Bastin E S，Greer F E，Merritt C A，et al.The presence of sulphate reducing bacteria in oil field waters[J]. Science，1926，63（1618）: 21-24.

[62]　Magot M，Ollivier B，Patel B K C.Microbiology of Petroleum reservoirs[J]. Antonievan LeeuwenLhoek，2000，77（2）: 103-116.

[63]　Miranda-Tello E，Fardeau M L，Sepúlveda J，et al.Garciella nitratireducens gen. nov.，sp. nov.，an anaerobic，thermophilic，nitrate-and thiosulfate-reducing bacterium isolated from an oilfield separator in the Gulf of Mexico[J]. International Journal of Systematic and Evolutionary Microbiology，2003，53（5）: 1509-1514.

[64]　Takahata Y，Nishijima M，Hoaki T，et al.Distribution and physiological characteristics of hyperthermophiles in the Kubiki oil reservoir in Niigata，Japan[J]. Applied and Environmental Microbiology，2000，66（1）: 73-79.

[65]　Fardeau M L，Magot M，Patel B K，et al.Thermoanaerobacter subterraneus sp. nov.，a novel thermophile isolated from oilfield water[J]. International Journal of Systematic and Evolutionary Microbiology，2000，50（6）: 2141-2149.

[66]　Bhupathiraju V K，McInerney M J，Woese C R，et al.Haloanaerobium kushneri sp. nov.，an obligately halophilic，anaerobic bacterium from an oil brine[J]. International Journal of Systematic Bacteriology，1999，49（3）: 953-960.

[67]　Castro H F，Williams N H，Ogram A.Phylogeny of sulfate-reducing bacteria[J]. FEMS Microbiology Ecology，2000，31（1）: 1-9.

[68]　Woese C R.Bacterial evolution[J]. Microbiological Reviews，1987，51（2）: 221.

[69]　Devereux R，He S H，Doyle C L，et al.Diversity and origin of Desulfovibrio species: phylogenetic definition of a family[J]. Journal of Bacteriology，1990，172（2）: 3609-3619.

[70]　Widdel F，Bak F. Gram-negative mesophilic sulfate-reducing bacteria，the Prokaryotes [M]. New York: Springer Verlag，1992: 3352-3378.

[71]　Dhillon A，Teske A，Dillon J，et al.Molecular characterization of sulfate-reducing bacteria in the Guaymas Basin[J]. Applied and Environmental Microbiology，2003，69（5）: 2765-2772.

[72]　Rabus R，Nordhaus R，Ludwig W，et al.Complete oxidation of toluene under strictly anoxic conditions by a new sulfate-reducing bacterium[J].Applied and Environmental Microbiology，1993，59（5）: 1444-1451.

[73]　Beller H R，Spormann A M，Sharma P K，et al.Isolation and characterization of a novel toluene-degrading，sulfate-reducing bacterium[J]. Applied and Environmental Microbiology，1996，62（4）: 1188-1196.

[74]　Harms G，Zengler K，Rabus R，et al.Anaerobic oxidation of o-xylene，w-xylene，and homologous alkylbenzenes by new types of sulfate-reducing bacteria[J]. Applied and Environmental Microbiology，1999b，65（3）: 999-1004.

[75]　Kniemeyer O，Fischer T，Wilkes H，et al.Anaerobic degradation of ethylbenzene by a new type of marine sulfate-reducing bacterium[J]. Applied and Environmental Microbiology，2003，69（2）: 760-768.

[76]　Morasch B，Schink B，Tebbe C C，et al.Degradation of o-xylene and w-xylene by a novel sulfate-reducer belonging to the genus Desulfotomaculum[J]. Archives of Microbiology，2004，181（6）: 407-417.

[77]　Ommedal H，Torsvik T. Desulfotignum toluenicum sp. nov.，a novel toluene-degrading，sulphate-reducing bacterium isolated from an oil-reservoir model column[J]. International Journal of Systematic and Evolutionary Microbiology，2007，57（12）: 2865-2869.

[78]　Galushko A，Minz D，Schink B，et al.Anaerobic degradation of naphthalene by a pure culture of a novel type of marine sulphate-reducing bacterium[J]. Environmental Microbiology，1999，1（5）: 415-420.

[79]　Aeckersberg F，Rainey F A，Widdel F.Growth，natural relationships，cellular fatty acids and metabolic adaption of sulfate-reducing bacteria that utilize long-chain alkanes under anoxic conditions[J]. Archives of Microbiology，1998，170（5）: 361-369.

[80]　So C M，Young L Y.Isolation and characterization of a sulfate-reducing bacterium that anaerobically degrades alkanes[J]. Applied and Environmental Microbiology，1999，65（7）: 2969-2976.

[81]　Cravo-Laureau C，Grossi V，Raphel D，et al.Anaerobic n-alkane metabolism by a sulfate-reducing bacterium，Desulfatibacillum aliphaticivorans strain CV2803T[J]. Applied and Environmental Microbiology，2005，71（7）: 3458-3467.

[82]　Davidova I A，Duncan K E，Choi O K，et al.Desulfoglaeba alkanexedens gen. nov.，sp. nov.，an n-alkane-degrading，sulfate-reducing bacterium[J]. International Journal of Systematic and Evolutionary Microbiology，2006，56（12）: 2737-2742.

[83]　Kniemeyer O，Musat F，Sievert S M，et al.Anaerobic oxidation of short-chain hydrocarbons by marine sulphate-reducing bacteria[J]. Nature，2007，449（7164）: 898-901.

[84]　Higashioka Y，Kojima H，Nakagawa T，et al.A novel n-alkane-degrading bacterium as a minor member of pxylene degmding sulfate-reducing consortium[J]. Biodegradation，2009，20（3）: 383-390.

[85]　Foght J. Anaerobic biodegradation of aromatic hydrocarbons: pathways and prospects[J].Journal of Molecular Microbiology and Biotechnology，2008，15（2-3）: 93-120.

[86]　胡恒宇，顧貴洲，張強，趙東風，等. 殘余油微生物氣化產甲烷菌群的研究進展[J]. 化學與生物工程，2014，31（4）: 9-14.

[87]　Rabus R，Fukui M，Wilkes H，et al.Degradative capacities and 16S rRNA-targeted whole-cell hybridization of sulfate-reducing bacteria in an anaerobic enrichment culture utilizing alkylbenzenes from crude oil[J]. Applied and Environmental Microbiology，1996，62（10）: 3605-3613.

[88]　Rueter P，Rabus R，Wilkes H，Aeekersberg F A，et al.Anaerobic oxidation of hydrocarbons in crude oil by new types of sulphate-reducing bacteria[J].Nature，1994，372（6505）: 455-458.

[89]　So C M，Young L Y.Initial reactions in anaerobic alkane degradation by a sulfate reducer，strain AK-01[J]. Applied and Environmental Microbiology，1999，65（12）: 5532-5540.

[90]　Cravo-Laureau C，Matheron R，Joulian C，Cayol J L. Desulfatibacillum alkenivorans sp. nov.，a novel n-alkene-degrading，sulfate-reducing bacterium，and emended description of the genus Desulfatibacillum[J]. International Journal of Systematic and Evolutionary Microbiology，2004，54（11）: 1639-1642.

[91]　Musat F，Galushko A，Jacob J，et al. Anaerobic degradation of naphthalene and 2-methylnaphthalene by strains of marine sulfate-reducing bacteria[J]. Environmental Microbiology，2009，11（1）: 209-214.

[92]　Dolfing J，Zeyer J，Binder-Eicher P，et al. Isolation and characterization of a bacterium that mineralizes toluene in the absence of molecular oxygen[J]. Archives of Microbiology，1990，154（4）: 336-341.

[93]　Evans P J，Mang D T，Kim K S，et al.Anaerobic degradation of toluene by a denitrifying bacterium[J].Applied and Environmental Microbiology，1991，57（4）：1139-1145.

[94]　Schocher R J，Seyfried B，Vazquez F，et al.Anaerobic degradation of toluene by pure cultures of denitrifying bacteria[J].Archives of Microbiology，1991，157（1）：7-12.

[95]　Zhou J，Fries M R，Chee-Sanford J C，et al.Phylogenetic analyses of a new group of denitrifiers capable of anaerobic growth on toluene and description of Azoarcus tolulyticus sp.nov[J].International Journal of Systematic Bacteriology，1995，45（3）：500-506.

[96]　Fries M R，Zhou J，Chee-Sanford J，et al.Isolation，characterization，and distribution of denitrifying toluene degraders from a variety of habitats[J].Applied and Environmental Microbiology，1994，60（8）：2802-2810.

[97]　Rabus R，Widdel F.Anaerobic degradation of ethylbenzene and other aromatic hydrocarbons by new denitrifying bacteria[J].Archives of Microbiology，1995，163（2）：96-103.

[98]　W?hlbrand L，Kallerhoff B，Lange D，et al.Functional proteomic view of metabolic regulation in “Aromatoleum aromaticum” strain EbN1[J].Proteomics，2007，7（13）：2222-2239.

[99]　Ball H A，Johnson H A，Reinhard M，et al.Initial reactions in anaerobic ethylbenzene oxidation by a denitrifying bacterium，strain EB1[J].Journal of Bacteriology，1996，178（19）：5755-5761.

[100]　Hess A，Zarda B，Hahn D，et al.In situ analysis of denitrifying toluene and OT-xylene-degrading bacteria in a diesel fuel-contaminated laboratory aquifer column[J].Applied and Environmental Microbiology，1997，63（6）：2136-2141.

[101]　Fries M R，Forney L J，Tiedje J M.Phenol and toluene-degrading microbial populations from an aquifer in which successful trichloroethene cometabolism occurred[J].Applied and Environmental Microbiology，1997，63（4）：1523-1530.

[102]　Harms G，Rabus R，Widdel F.Anaerobic oxidation of the aromatic plant hydrocarbon p-cymene by newly isolated denitrifying bacteria[J].Archives of Microbiology，1999a，172（5）：303-312.

[103]　Coates J D，Chakraborty R，Lack J G，et al.Anaerobic benzene oxidation coupled to nitrate reduction in pure culture by two strains of Dechloromonas[J].Nature，2001b，411（6841）：1039-1043.

[104]　Coates J D，Bhupathiraju V K，Achenbach L A，et al.Geobacter hydrogenophilus，Geobacter chapellei and Geobacter grbiciae，three new，strictly anaerobic，dissimilatory Fe（Ⅲ）-reducers[J].International Journal of Systematic and Evolutionary Microbiology，2001a，51（2）：581-588.

[105]　Tor J M，Lovley D R.Anaerobic degradation of aromatic compounds coupled to Fe（Ⅲ） reduction by Ferroglobus placidus[J].Environmental Microbiology，2001，3（4）：281-287.

[106]　Greene A C，Patel B K C，Sheehy A J.Deferribacter thermophilus gen.nov.，sp.nov.，a novel thermophilic manganese-and iron-reducing bacterium isolated from a petroleum reservoir[J].International Journal of Systematic Bacteriology，1997，47（2）：505-509.

[107]　Kunapuli U，Jahn M K，Lueders T，et al.Desulfitobacterium aromaticivorans sp.nov.And Geobacter toluenoxydans sp.nov.，iron-reducing bacteria capable of anaerobic degradation of monoaromatic hydrocarbons[J].International Journal of Systematic and Evolutionary Microbiology，2010，60（3）：686-695.

[108]　Alexander I S，Christian J，Stephane L H，et al.Dissimilatory Reduction of Fe（Ⅲ） by Thermophilic Bacteria and Archaea in Deep Subsurface Petroleum Reservoirs of western Siberia[J].Current Microbiology，1999，39（2）：99-102.

[109]　Vargas M，Kashefi K，Blunt-Harris E L，Loviey D R.Microbiological evidence for Fe （Ⅲ） reduction on early Earth[J].Nature，1998，395（6697）：65-67.

[110]　Chakraborty R，Coates J D.Hydroxylation and carboxylation-two crucial steps of anaerobic benzene degradation by Dechloromonas strain RCB[J].Applied and Environmental Microbiology，2005，71（9）：5427-5432.

[111]　Mechichi T，Stackebrandt E，Gad′on N，et al.Phylogenetic and metabolic diversity of bacteria degrading aromatic compounds under denitrifying conditions，and description of Thauera phenylacetica sp.nov.，Thauera aminoaromaticasp.nov.，and Azoarcus buckelii sp.nov[J].Archives of Microbiology，2002，178（1）：26-35.

[112]　Shinoda Y，Sakai Y，Uenishi H，et al.Aerobic and anaerobic toluene degradation by a newly isolated denitrifying bacterium，Thauera sp.strain DNT-1[J].Applied and Environmental Microbiology，2004，70（3）：1385-1392.

[113]　Weelink S A B，Van Doesburg W，Saia F T，et al.A strictly anaerobic betaproteobacterium Georgfuchsia toluolica gen.nov，sp.nov.degrades aromatic compounds with Fe （Ⅲ），Mn （Ⅳ） or nitrate as an electron acceptor[J].FEMS Microbiology Ecology，2009，70（3）：575-585.

[114]　Rockne K J，Chee-Sanford J C，Sanford R A，et al.Anaerobic naphthalene degradation by microbial pure cultures under nitrate-reducing conditions[J].Applied and Environmental Microbiology，2000，66（4）：1595-1601.

[115]　Ehrenreich P，Behrends A，Harder J，et al.Anaerobic oxidation of alkanes by newly isolated denitrifying bacteria[J].Archives of Microbiology，2000，173（1）：58-64.

[116]　Zedelius J，Rabus R，Grundmann O，et al.Alkane degradation under anoxic conditions by a nitrate-reducing bacterium with possible involvement of the electron acceptor in substrate activation[J].Environmental Microbiology Reports，2011，3（1）：125-135.

[117]　Anders H J，Kaetzke A，K?MPFER P，et al.Taxonomic position of aromatic degrading denitrifying pseudomonad strains K172 and KB740 and their description as new members of the genera Thauera，as Thauera aromatica sp.nov.，and Azoarcus，as Azoarcus evansii sp.nov.，respectively，members of the beta subclass of the Proteobacteria[J].International Journal of Systematic Bacteriology，1995，45（2）：327-333.

[118]　傅霖，辛明秀.產甲烷菌的生態多樣性及工業應用[J].應用與環境生物學報，2009，15（4）：574-578.

[119]　龍勝祥，陳純芳，李辛子，等.中國石化煤層氣資源發展前景[J].石油與天然氣地質，2011，03（4）：481-488.

[120]　Lowe D C.Global change：A green source of surprise[J].Nature，2006，439（7073）：148-149.

[121]　程海鷹，肖生科，馬光東，等.營養注入后油藏微生物群落16SrRNA基因的T-RFLP對比分析[J].石油勘探與開發，2006，33（3）：356-359.

[122]　Ferry J G.Methane：small molecule，big impact[J].Science，1997，278（5342）：13-14.

[123]　Belyaev S S，Wolkin R，Kenealy W R，et al.Methanogenic bacteria from the Bondyuzhskoe oil field：general characterization and analysis of stable-carbon isotopic fractionation[J].Applied and Environmental Microbiology，1983，45（2）：691-697.

[124]　Ivanov M V，Belyaev S S，Zyakun A M，et al.Microbiological formation of methane in the oil-field development[J].Geokhimiya，1983 （11）：1647-1654.

[125]　Ravot G，Magot M，Fardeau M L，et al.Thermotoga elfii sp.nov.，a novel thermophilic bacterium from an African oil-producing well[J].International Journal of Systematic Bacteriology，1995，45（2）：308-314.

[126]　Nilsen R K，Torsvik T.Methanococcus thermolithotrophicus Isolated from North Sea Oil Field Reservoir Water[J].Applied and Environmental Microbiology，1996，62（2）：728-731.

[127]　Ollivier B，Cayol J L，Patel B K C，et al.Methanoplanus petrolearius sp.nov.，a novel methanogenic bacterium from an oil-producing well[J].FEMS Microbiology Letters，1997，147（1）：51-56.

[128]　Ollivier B，Fardeau M L，Cayol J L，et al.Methanocalculus halotolerans gen.nov.，sp.nov.，isolated from an oil-producing well[J].International Journal of Systematic Bacteriology，1998，48（3）：821-828.

[129]　Obraztsova A Y，Shipin O V，Bezrukova L V，et al.Properties of the coccoid methylotrophic methanogen，methanococcoides-euhalobius sp-nov[J].Microbiology，1987，56（4）：523-527.

[130]　Davidova I A，Hannsen H J M，Stams A J M，et al.Taxonomic description of Methanococcoides euhalobius and its transfer to the Methanohalophilus genus[J].Ailtonie van Leeuwenhoek，1997，71（4）：313-318.

[131]　Ni S S，Boone D R.Isolation and characterization of a dimethyl sulfide-degrading methanogen，Methanolobus siciliae HI350，from an oil wel，characterization of Msieiliae T4/MT，and emendation of M.sieiliae[J].International Journal of Systematic and Evolutionary Microbiology 1991，41（3）：410-416.

[132]　Ni S，Woese C R，Aldrich H C，et al.NOTES：Transfer of Methanolobus siciliae to the Genus Methanosarcina，Naming It Methanosarcina siciliae，and Emendation of the Genus Methanosarcina[J].International Journal of Systematic Bacteriology，1994，44（2）：357-359.

[133]　Obraztsova A Y，Laurinavinchus K S，Bezrukova L V，et al.Biological properties of methanosarcina not utilizing carbonic-acid and hydrogen[J].Microbiology，1987，56（6）：807-812.

[134]　Grishehenkov V G，Townsend R T，MeDonald T J，et al.Degradation of Petroleum Hydroearbons by faeultative anaerobic baeteria under aerobic and anaerobic conditions[J].Process Bioehemistry，2000，（35）：889-896

[135]　汪洋，史典義，聶春雨，等.石油污染土壤的微生物修復技術[J].生物技術，2009，19（2）：94-96

[136]　Mckey A B，Coulon F.Efficacy of intervention strategies for bioremediation of crude oil in marine systems and effects on indigenous hydrocarbonoclastic bacteria[J].Environmental Microbiology，2007，9（6）：1562-1571

[137]　Oudot J，Dutrieux E.Hydrocarbon weathering and biodegradation in a tropical estuarine ecosystem[J].Marine Environmental Research，1989，27（3）：195-213.

[138]　何仕均，王建龍，趙璇.氨氮對厭氧顆粒污泥產甲烷活性的影響[J].清華大學學報，2005，45（9）：1294-1296.

[139]　Biswas J，Chowdhury R，Bhattacharya P.Kinetic studies of biogas generation using municipal waste as feed stock[J].Enzyme and Microbial Technology，2006，38（3）：493-503.

[140]　Stabnikova O.Quantification of methanogens by fluorescence in situ hybridization with oligonucleotide probe[J].Applied Microbiology and Biotechnology，2006（73）：696-702.

[141]　宋華.石油烴類污染物的微生物修復技術[J].環境科學與管理，2013，38（2）：83-88.

[142]　Aitken C M，Jones D M，Maguire M J，et al.Evidence that crude oil alkane activation proceeds by different mechanisms under sulfate-reducing and methanogenic conditions[J].Geochimica et Cosmochimica Acta，2013，109（11）：162-174.

[143]　Gieg L M，Fowler S J，Berdugo-Clavijo C.Syntrophic biodegradation of hydrocarbon contaminants[J].Current Opinion in Biotechnology，2014，27（5）：21-29.

[144]　承磊，仇天雷，鄧宇，等.油藏厭氧微生物研究進展[J].應用與環境生物學報，2006，12（5）：740-744.

[145]　Chen Y，Cheng J J，Creamer K S.Inhibition of anaerobic digestion process：a review[J].Bioresource Technology，2008，99（10）：4044-4064.

[146]　于章曉.厭氧發酵過程中溫度對甲烷產量的影響[J].生態科學，2004，23（4）：310-314.

[147]　Nüsslein B，Chin K J，Eckert W，Conrad R.Evidence for anaerobic syntrophic acetate oxidation during methane production in the profundal sediment of subtropical Lake Kinneret [J].Environmental Microbiology，2001，3（7）：460-470.

[148]　Ahring B K.Methanogenesis in thermophilic biogas reactors[J].Antonie van Leeuwenhoek，1995，67（1）：91-102.

[149]　Zinder S H，Koch M.Non-aceticlastic methanogenesis from acetate：acetate oxidation by a thermophilic syntrophic coculture[J].Archives of Microbiology，1984，138（3）：263-272.

[150]　Eriksson S，Hallbeck L，Ankner T，et al.Indicators of petroleum hydrocarbon biodegradation in anaerobic granitic groundwater[J].Geomicrobiology Journal，2006，23（1）：45-58.

[151]　Boll M，Fuchs G，Heider J.Anaerobic oxidation of aromatic compounds and hydrocarbons[J].Current Opinion in Chemical Biology，2002，6（5）：604-611.

[152]　Bombach P，Richnow H H，K?stner M，et al.Current approaches for the assessment of in situ biodegradation[J].Applied Microbiology and Biotechnology，2010，86（3）：839-852.

[153]　Ulrich A C，Bller H R，Edwards E A.Metabolites detected during biodegradation of 13C6-benzene in nitrate-reducing and methanogenic enrichment cultures[J].Environmental Science and Technology，2005，39（17）：6681-6691.

[154]　Albert D B，Martens C S.Determination of low-molecular-weight organic acid concentrations in seawater and pore-water samples via HPLC[J].Marine Chemistry，1997，56（1）：27-37.

[155]　Beller H R，Ding W H，Reinhard M.Byproducts of anaerobic alkylbenzene metabolism useful as indicators of in situ bioremediation[J].Environmental Science and Technology，1995，29 （11）：2864-2870.

[156]　Reusser D E，Field J A.Determination of benzylsuccinic acid in gasoline-contaminated groundwater by solid-phase extraction coupled with gas chromatography-mass spectrometry [J].J.Chromatogr A，2002，953 （1/2）：215-225

[157]　周蕾，王立影，劉金峰，等.石油烴厭氧生物降解代謝產物研究進展[J].應用與環境生物學報，2011，17（4）：607-613.

[158]　Rabus R，Wilkes H，Behrends A，et al.Anaerobic initial reaction of n-alkanes in a denitrifying bacterium：evidence for （1-methylpentyl） succinate as initial product and for involvement of an organic radical in n-hexane metabolism[J].Journal of Bacteriology，2001，183（5）：1707-1715.

[159]　Rabus R，Heider J.Initial reactions of anaerobic metabolism of alkylbenzenes in denitrifying and sulfate-reducing bacteria[J].Archives of Microbiology，1998，170（5）：377.

[160]　Johnson H A，Pelletier D A，Spormann A M.Isolation and characterization of anaerobic ethylbenzene dehydrogenase，a novel Mo-Fe-S enzyme[J].Journal of Bacteriology，2001，183（15）：4536-4542.

[161]　Coates J D，Chakraborty R，McInerney M J.Anaerobic benzene biodegradation-a new era[J].Research in Microbiology，2002，153（10）：621-628.

[162]　Safinowski M，Meckenstock R U.Methylation is the initial reaction in anaerobic naphthalene degradation by a sulfate-reducing enrichment culture[J].Environmental Microbiology，2006，8（2）：347-352.

[163]　So C M，Phelps C D，Young L Y.Anaerobic transformation of alkanes to fatty acids by a sulfate-reducing bacterium，strain Hxd3[J].Applied and Environmental Microbiology，2003，69（7）：3892-3900.

[164]　Bamforth S M，Singleton I.Bioremediation of polycyclic aromatic hydrocarbons：current knowledge and future directions[J].Journal Chemical Technology Biotechnology，2005，80（7）：723-736.

[165]　Chen Y，Murrell J C.When metagenomics meets stableisotope probing：progress and perspectives[J].Trends in Microbiology，2010，18（4）：157-163.

[166]　Xia W，Zhang C，Zeng X，et al.Autotrophic growth of nitrifying community in an agricultural soil[J].The ISME Journal，2011，5（7）：1226-1236.

[167]　Muyzer G，De Waal E C，Uitterlinden A G.Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA[J].Applied and Environmental Microbiology，1993，59（3）：695-700.

[168]　Gomesn C M，Fagbola O，Costa R，et al.Dynamics of fungal communities in bμLk and maize rhizosphere soil in the tropics[J].Applied and Environmental Microbiology，2003，69（7）：3758-3766.

[169]　程海鷹，肖生科，汪衛東，等.變性梯度凝膠電泳方法在內源微生物驅油研究中的應用[J].石油學報，2006，26（6）：82-85.

[170]　Fischer S G，Lerman L S.Length-independent separation of DNA restriction fragments in two-dimensional gel electrophoresis[J].Cell，1979，16（1）：191-200.

[171]　Zwart G，Huismans R，van Agterveld M P，et al.Divergent members of the bacterial division Verrucomicrobiales in a temperate freshwater lake[J].FEMS Microbiology Ecology，1998，25（2）：159-169.

[172]　Ferris M J，Muyzer G，Ward D M.Denaturing gradient gel electrophoresis profiles of 16SrRNA-defined popμLations inhabiting a hot spring microbial mat community[J].Applied and Environmental Microbiology，1996，62（2）：340-346.

[173]　Walter J，Tannock G W，Tisala-Timisgaray A，et al.Detection and identification of gastrointestinal Lactobacillus species by using denaturing gradient gel electrophoresis and species-specific PCR primers[J].Applied and Environmental Microbiology，2000，66（1）：297-303.

[174]　Teske A，Wawer C，Muyzer G，et al.Distribution of sμLfate-reducing bacteria in a stratified fjord （Mariager Fjord，Denmark）as evaluated by most-probable-numbercounts and denaturing gradient gel electrophoresis of PCR-amplifiedribosomal DNA fragment [J].Applied and Environmental Microbiology，1996 ，62（4）：1405-1415.

[175]　Ibrahim A，Ahring B K.Extraction of intact ribosomal RNA from anaerobic bioreactor samples for molecular ecological studies[J].Biotechniques，1999，27（6）：1132-1138.

[176]　Smalla K，Wieland G，Buchner A，et al.Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gelelectrophoresis：plant-dependent enrich mentand season alshift revealed[J].Applied and Environmental Microbiology，2001，67（10）：4742-4751.

[177]　賈仲軍.穩定性同位素核酸探針技術 DNA-SIP 原理與應用[J].微生物學報，2011，51（12）：1585-1594.

[178]　張琴，莢榮，豆長明，等.重金屬污染土壤總 DNA 提取方法的研究—土壤預處理和硫酸銨鋁在 DNA 提取中的應用[J].微生物學通報，2014，41（1）：191-199.

[179]　Blume F，Bergmann I，Nettmann E，et al.Methanogenic population dynamics during semi-continuous biogas fermentation and acidification by overloading[J].Journal of Applied Microbiology，2010，109（2）：441-450.

[180]　Feng X M，Karlsson A，Svensson B H，Bertilsson S.Impact of trace element addition on biogas production from food industrial waste–linking process to microbial communities[J].FEMS Microbiology Ecology，2010，74（1）：226-240.

[181]　Fotidis I A，Karakashev D，Kotsopoulos T A，et al.Effect of ammonium and acetate on methanogenic pathway and methanogenic community composition[J].FEMS Microbiology Ecology，2013，83（1）：38-48.

[182]　Hao L P，Lu F，He P J，et al.Predominant contribution of syntrophic acetate oxidation to thermophilic methane formation at high acetate concentrations[J].Environmental Science and Technology，2010，45（2）：508-513.

[183]　Cereal Genomics：Methods and Protocols[Z].Humana Press，2014.

[184]　Logue J B，Langenheder S，Andersson A F，et al.Freshwater bacterioplankton richness in oligotrophic lakes depends on nutrient availability rather than on species–area relationships[J].The ISME Journal，2012，6（6）：1127-1136.

[185]　Munk B，Bauer C，Gronauer A，Lebuhn M.Population dynamics of methanogens during acidification of biogas fermenters fed with maize silage[J].Engineering in Life Sciences，2010，10（6）：496-508.

[186]　Nettmann E，Bergmann I，Pramschüfer S，et al.Polyphasic analyses of methanogenic archaeal communities in agricultural biogas plants[J].Applied and Environmental Microbiology，2010，76（8）：2540-2548.

[187]　Rademacher A，Zakrzewski M，Schlüter A，et al.Characterization of microbial biofilms in a thermophilic biogas system by High-throughput metagenome sequencing[J].FEMS Microbiology Ecology，2012，79（3）：785-799.

[188]　Sasaki D，Hori T，Haruta S，Ueno Y，et al.Methanogenic pathway and community structure in a thermophilic anaerobic digestion process of organic solid waste[J].Journal of Bioscience and Bioengineering，2011，111（1）：41-46.

[189]　Westerholm M.Biogas production through the syntrophic acetate-oxidising pathway[M].Amsterdam：Elsevier Science，2012：67-86.

[190]　Ziganshin A M，Schmidt T，Scholwin F，et al.Bacteria andarchaea involved in anaerobic digestion of distillers grains with solubles[J].Applied Microbiology and Biotechnology，2011，89（6）：2039-2052.